Nghiên cứu ứng dụng chỉ thị phân tử phục vụ chọn tạo giống bí đỏ Cucurbita spp. có hàm lượng chất khô cao

65 - attached to c4 ok

30> frame c4

setting framework for chromosome c4...

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========================

c4 framework:

Markers Distance

42 CMTmC15 16.4 cM

64 CMTm96 15.3 cM

25 CMTm188 15.2 cM

5 CMTm83 18.0 cM

6 CMTm233 19.7 cM

55 CMTm207 17.3 cM

32 CMTmC61 16.7 cM

36 CMTm230 14.7 cM

65 CMTm236 ----------

133.3 cM 9 markers log-likelihood= -339.08

=======================================================

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31> seq {group5}

sequence #10= {group5}

32> compare

Best 20 orders:

24 54 10 45 57 7	Like: 0.00
2:	7 54 24 57 45 10	Like: -0.72
3:	24 54 7 57 45 10	Like: -1.01
4:	7 54 24 10 45 57	Like: -1.18
5:	54 24 10 45 57 7	Like: -1.65
6:	7 24 54 10 45 57	Like: -1.81
7:	7 54 24 57 10 45	Like: -1.86
8:	24 54 7 57 10 45	Like: -2.37
9:	54 24 7 57 45 10	Like: -3.01
10:	24 54 10 45 7 57	Like: -3.42
11:	45 10 54 24 57 7	Like: -3.50
12:	24 54 7 45 10 57	Like: -3.79
13:	45 10 24 54 7 57	Like: -3.92
14:	7 54 24 10 57 45	Like: -4.11
15:	54 24 57 10 45 7	Like: -4.23
16:	45 10 54 24 7 57	Like: -4.27

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17:

54 24 7 57 10 45	Like: -4.37
18:	24 54 10 57 45 7	Like: -4.51
19:	7 54 10 45 57 24	Like: -4.57
20:	7 24 54 10 57 45	Like: -4.74

order1 is set

33> make chromosome c5 chromosomes defined: c1 c2 c3 c4 c5 34> seq order1

sequence #11= order1

35> attach c5

24 - attached to c5

54 - attached to c5

10 - attached to c5

45 - attached to c5

57 - attached to c5

7 - attached to c5 ok

36> frame c5

setting framework for chromosome c5...

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========================

c5 framework:

Markers Distance 24 CMTm10 13.9 cM

54 CMTp182 17.8 cM

10 CMTm261 14.9 cM

45 CMTm47 16.7 cM

57 CMTmC16 18.6 cM

7 CMTp39 ----------

81.9 cM 6 markers log-likelihood= -230.39

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37> seq {group6}

sequence #12= {group6}

38> compare

Best 20 orders:

1: 46 11 44 50 9 31 62 43 Like: 0.00

2: 31 9 50 44 11 62 43 46 Like: -0.15

3: 46 11 44 50 31 9 62 43 Like: -0.50

4: 31 9 50 44 11 46 62 43 Like: -1.12

31 9 50 44 11 46 43 62	Like: -1.63
6:	46 11 50 44 31 9 62 43	Like: -1.78
7:	31 9 50 44 46 11 62 43	Like: -1.86
8:	46 11 44 31 50 9 62 43	Like: -2.36
9:	31 44 11 50 9 62 43 46	Like: -2.49
10:	44 50 11 46 43 62 9 31	Like: -2.75
11:	46 11 44 50 9 62 43 31	Like: -2.97
12:	31 9 50 11 44 62 43 46	Like: -3.02
13:	50 44 11 46 43 62 9 31	Like: -3.14
14:	31 11 44 50 9 62 43 46	Like: -3.28
15:	31 50 9 62 43 46 11 44	Like: -3.29
16:	44 11 50 9 31 62 43 46	Like: -3.49
17:	46 11 50 9 31 44 62 43	Like: -3.62
18:	46 11 44 50 43 62 9 31	Like: -3.70
19:	44 31 9 50 11 62 43 46	Like: -3.74
20:	31 44 11 46 50 9 62 43	Like: -3.78

order1 is set

39> make chromosome c6 chromosomes defined: c1 c2 c3 c4 c5 c6 40> seq order1

sequence #13= order1

41> attach c6

46 - attached to c6

11 - attached to c6

44 - attached to c6

50 - attached to c6

9 - attached to c6

31 - attached to c6

62 - attached to c6

43 - attached to c6 ok

42> frame c6

setting framework for chromosome c6...

=======================================================

========================

c6 framework:

Markers Distance

46 CMTmC22 17.6 cM

11 CMTp188 16.3 cM

44 CMTm214 17.3 cM

50 CMTmC40 15.6 cM

9 CMTmC21 18.6 cM

31 CMTm49 21.9 cM

62 CMTp177 18.0 cM

43 CMTp18 ----------

125.3 cM 8 markers log-likelihood= -315.58

=======================================================

========================

43> seq {group7}

sequence #14= {group7}

44> compare

Best 20 orders:

1: 12 21 61 68 29 58 Like: 0.00

2: 21 61 68 29 58 12 Like: -0.69

3: 58 21 61 68 29 12 Like: -1.67

4: 21 61 68 58 29 12 Like: -2.70

5: 12 29 58 21 61 68 Like: -3.07

6: 21 61 68 29 12 58 Like: -3.20

7: 12 58 21 61 68 29 Like: -3.28

8: 12 21 61 68 58 29 Like: -3.63

9: 58 29 12 21 61 68 Like: -3.88

10: 58 12 21 61 68 29 Like: -3.96

11: 21 61 68 12 29 58 Like: -5.02

12: 12 58 29 21 61 68 Like: -5.10

13: 29 58 21 61 68 12 Like: -5.18

14: 58 61 21 68 29 12 Like: -5.34

15: 29 58 12 21 61 68 Like: -5.39

16: 61 21 68 29 58 12 Like: -5.59

17: 58 29 21 61 68 12 Like: -5.62

18: 12 61 21 68 29 58 Like: -5.62

19: 12 29 21 61 68 58 Like: -5.67

20: 29 12 21 61 68 58 Like: -5.91

order1 is set

45> make chromosome c7

chromosomes defined: c1 c2 c3 c4 c5 c6 c7 46> seq order1

sequence #15= order1

47> attach c7

12 - attached to c7

21 - attached to c7

61 - attached to c7

68 - attached to c7

29 - attached to c7

58 - attached to c7 ok

48> frame c7

setting framework for chromosome c7...

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========================

c7 framework:

Markers Distance 12 CMTp224 20.3 cM

21 CMTm88 7.8 cM

6 CMTp264 10.4 cM

68 CMTm130 15.4 cM

29 CMTm204 16.4 cM

58 CMTm164 ----------

70.3 cM 6 markers log-likelihood= -215.45

=======================================================

========================

49> seq {group8}

sequence #16= {group8}

50> compare

Best 20 orders:

15 23 16 27 18	Like: 0.00
2:	15 23 27 16 18	Like: -1.07
3:	18 23 16 27 15	Like: -1.50
4:	18 15 23 16 27	Like: -2.02
5:	15 23 16 18 27	Like: -2.10
6:	15 18 23 16 27	Like: -2.15
7:	15 23 18 16 27	Like: -2.78
8:	18 16 23 15 27	Like: -3.22
9:	18 16 23 27 15	Like: -3.64
10:	15 16 23 27 18	Like: -3.92
11:	15 16 23 18 27	Like: -4.01
12:	15 18 16 23 27	Like: -4.18
13:	18 23 15 16 27	Like: -4.52
14:	18 16 15 23 27	Like: -4.74
15:	18 23 27 16 15	Like: -4.78
16:	18 23 16 15 27	Like: -5.05
17:	15 23 18 27 16	Like: -5.49
18:	23 16 27 18 15	Like: -5.72

19: 18 15 23 27 16 Like: -5.73

20: 16 23 15 27 18 Like: -5.90

order1 is set

51> make chromosome c8

chromosomes defined: c1 c2 c3 c4 c5 c6 c7 c8 52> seq order1

sequence #17= order1

53> attach c8

15 - attached to c8

23 - attached to c8

16 - attached to c8

27 - attached to c8

18 - attached to c8 ok

54> frame c8

setting framework for chromosome c8...

=======================================================

========================

c8 framework:

Markers Distance

15 CMTmC31 8.7 cM

23 CMTm48 6.4 cM

16 CMTp252 8.8 cM

27 comp7228 11.2 cM

18 CMTm209 ----------

35.2 cM 5 markers log-likelihood= -153.65

=======================================================

========================

55> seq {group9}

sequence #18= {group9}

56> compare

Best 20 orders:

41 19 69 71 35	Like: 0.00
2:	69 71 35 41 19	Like: -1.01
3:	69 19 41 35 71	Like: -2.51
4:	19 69 71 35 41	Like: -2.77
5:	41 19 69 35 71	Like: -3.05
6:	35 41 19 69 71	Like: -3.37
7:	69 35 71 19 41	Like: -4.48
8:	19 41 69 71 35	Like: -4.88

69 71 35 19 41	Like: -4.90
10:	19 41 35 69 71	Like: -5.29
11:	69 71 19 41 35	Like: -5.46
12:	69 19 71 35 41	Like: -5.61
13:	69 19 41 71 35	Like: -5.92
14:	35 69 71 19 41	Like: -6.42
15:	69 41 19 71 35	Like: -7.13
16:	69 35 71 41 19	Like: -7.47
17:	19 41 69 35 71	Like: -7.87
18:	69 35 41 19 71	Like: -8.70
19:	41 69 19 71 35	Like: -8.85
20:	19 69 35 71 41	Like: -9.09

order1 is set

57> make chromosome c9

chromosomes defined: c1 c2 c3 c4 c5 c6 c7 c8 c9 58> seq order1

sequence #19= order1

59> attach c9

41 - attached to c9

19 - attached to c9

69 - attached to c9

71 - attached to c9

35 - attached to c9 ok

60> frame c9

setting framework for chromosome c9...

=======================================================

========================

c9 framework:

Markers Distance

41 CMTm219 13.5 cM

19 CMTmC33 14.5 cM

69 CMTmC3 13.2 cM

71 CMTp97 12.4 cM

35 CMTp84 ----------

53.6 cM 5 markers log-likelihood= -184.30

=======================================================

========================

61> seq {group10}

sequence #20= {group10}

62> compare

Best 20 orders:

1: 22 48 33 59 60 34 49 Like: 0.00

2: 22 48 33 59 49 34 60 Like: -1.32

3: 22 48 33 59 60 49 34 Like: -1.65

4: 22 48 59 33 49 34 60 Like: -2.75

5: 59 22 48 33 49 34 60 Like: -3.16

6: 33 48 22 59 60 34 49 Like: -3.26

7: 49 34 22 48 33 59 60 Like: -3.51

8: 48 22 59 33 49 34 60 Like: -3.70

9: 22 59 33 48 60 34 49 Like: -3.75

10: 33 59 22 48 60 34 49 Like: -3.95

11: 34 49 33 48 22 59 60 Like: -4.07

12: 59 33 48 22 34 49 60 Like: -4.08

13: 33 48 22 59 49 34 60 Like: -4.47

14: 33 48 22 59 60 49 34 Like: -4.84

15: 22 48 33 59 34 49 60 Like: -5.00

16: 34 49 33 59 22 48 60 Like: -5.12

17: 22 59 33 48 60 49 34 Like: -5.50

18: 59 33 48 22 60 34 49 Like: -5.59

19: 49 34 33 48 22 59 60 Like: -5.68

20: 33 59 22 48 60 49 34 Like: -5.70

order1 is set

63> make chromosome c10

chromosomes defined: c1 c2 c3 c4 c5 c6 c7 c8 c9 c10 64> seq order1

sequence #21= order1

65> attach c10

22 - attached to c10

48 - attached to c10

33 - attached to c10

59 - attached to c10

60 - attached to c10

34 - attached to c10

49 - attached to c10 ok

66> frame c10

setting framework for chromosome c10...

=======================================================

========================

c10 framework:

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Ngày đăng: 11/07/2023